Last Updated: 25 Feb 2018

The PSHG SNPs are downstream of the R1b-M269 > R1b-U106 haplogroup.

The information below is the haplotree and SNP information published to date for R1b haplogroups FGC13602 > FGC13595 > FGC15217 & FGC13604 > FGC13609.  To protect privacy, it does not include our members’ Direct Paternal Lineage SNPs.

PSHG Haplotree

R1b-M269
• U106 / S21
• • Z381 / S263
• • • Z156 / S264
• • • • Z306 / S497
• • • • • Z304 / S265
• • • • • • BY12480 / FGC13329
• • • • • • • D96 / S1809
• • • • • • • • FGC13326
• • • • • • • • • • S22047
• • • • • • • • • • • FGC46344
• • • • • • • • • • • • S19552
• • • • • • • • • • • • FGC13602,FGC13603,FGC13610,FGC15221,A1231,A1232 [PSHG Associate Member SNPs]
• • • • • • • • • • • • • FGC13595, FGC13607
• • • • • • • • • • • • • • FGC15217 [PSHG Associate Member SNPs; YSEQ Panel Available]
• • • • • • • • • • • • • • FGC13604,A16447/BY16815 [PSHG Associate Member SNPs; YSEQ Panel Available]
• • • • • • • • • • • • • • • FGC13609,FGC13605,FGC13601,A1230 [PSHG Full Member SNPs]
• • • • • • • • • • • • • • • • [PSHG Member Direct Personal Lineage SNPs]

Note: SNPs found not suitable for testing are excluded from this haplotree.

Table of Y-SNP’s from FGC13602

Name chrY:  Position (hg38) Bases Remarks
FGC13602 12875829 G>C Group w/ FGC13602
FGC13603 14899087 T>C Group w/ FGC13602
FGC13610 21105481 G>A Group w/ FGC13602
FGC15221 13733582 C>T Group w/ FGC13602
A1231 12669434 A>T Group w/ FGC13602, (12669433, Z33483)
A1232 19995419 G>A Group w/ FGC13602
FGC13595 7151560 G>A Group w/ FGC13595
FGC13607 19892031 A>G Group w/ FGC13595
FGC15217 8650026 G>A  Group w/ FGC15217
FGC15216 8104806 A>G Group w/ FGC15217
FGC15219 12983437 A>C Group w/ FGC15217
FGC15220 13294018 C>A Group w/ FGC15217
FGC15222 15573364 C>T Group w/ FGC15217, (15573365,Y8462,FGC21027)
FGC15223 17295021 C>T Group w/ FGC15217
FGC15224 19822785 G>T Group w/ FGC15217
FGC13604 14961715 G>C Group w/ FGC13604
A16447/BY16815 9210668 C>T Group w/ FGC13604
A13585 7070862 G>A Group w/ FGC13604
A13586 8089920 C>T Group w/ FGC13604
A13587 8222312 A>T Group w/ FGC13604
A13588 10157528 G>A Group w/ FGC13604
A13589 12188333 A>G Group w/ FGC13604
A13590 14489864 T>C Group w/ FGC13604
A13592 16058533 C>T Group w/ FGC13604
A13593 20578657 A>G Group w/ FGC13604
FGC13609 20919447 T>G  Group w/ FGC13609
FGC13605 16600144 A>T Group w/ FGC13609
FGC13601 12602629 A>G Group w/ FGC13609
A1230 9127876 T>G Group w/ FGC13609

Also see Referenced Document PSHG Haplotree and Modal Haplotype 26feb18 for Printer Friendly information!

References:

  1. PSHG Technical Study book.
  2. PSHG Haplotree from R1b-U106 Haplogroup bigY analysis using PSHG members bigY hg38 VCF file and PSHG at YSEQ Gp 26 test results.
  3. SNP Positions and Bases from ISOGG Human Y Chromosome Browser (based on hg38) http://ybrowse.org/gb2/gbrowse/chrY/
  4. PSHG Haplotree and Modal Haplotype 26feb18, 26 February 2018 by Art Staples